HL_8ZH3_080
3D structure
- PDB id
- 8ZH3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/P-P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUAAUUC
- Length
- 7 nucleotides
- Bulged bases
- 8ZH3|1|S2|U|159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ZH3_080 not in the Motif Atlas
- Geometric match to HL_8CRE_193
- Geometric discrepancy: 0.197
- The information below is about HL_8CRE_193
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_34789.3
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 397
Unit IDs
8ZH3|1|S2|G|154
8ZH3|1|S2|U|155
8ZH3|1|S2|A|156
8ZH3|1|S2|A|157
8ZH3|1|S2|U|158
8ZH3|1|S2|U|159
8ZH3|1|S2|C|160
Current chains
- Chain S2
- chain 2 18S rRNA (1771-MER)
Nearby chains
- Chain ST
- Small ribosomal subunit protein eS6A
- Chain Sd
- Small ribosomal subunit protein eS24A
Coloring options: