HL_8ZHC_017

3D structure

PDB id

8ZHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

8ZHC|1|LA|C|733, 8ZHC|1|LA|A|734, 8ZHC|1|LA|A|735

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZHC_017 not in the Motif Atlas

Geometric match to HL_4WF9_011

Geometric discrepancy: 0.151

The information below is about HL_4WF9_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

8ZHC|1|LA|C|731
8ZHC|1|LA|G|732
8ZHC|1|LA|C|733
8ZHC|1|LA|A|734
8ZHC|1|LA|A|735
8ZHC|1|LA|G|736

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains