HL_8ZHC_028

3D structure

PDB id

8ZHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GUGUAACAAC

Length

10 nucleotides

Bulged bases

8ZHC|1|LA|U|1268, 8ZHC|1|LA|A|1269, 8ZHC|1|LA|A|1270, 8ZHC|1|LA|C|1271, 8ZHC|1|LA|A|1272, 8ZHC|1|LA|A|1273

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZHC|1|LA|G|1265
8ZHC|1|LA|U|1266
8ZHC|1|LA|G|1267
8ZHC|1|LA|U|1268
8ZHC|1|LA|A|1269
8ZHC|1|LA|A|1270
8ZHC|1|LA|C|1271
8ZHC|1|LA|A|1272
8ZHC|1|LA|A|1273
8ZHC|1|LA|C|1274

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains