HL_8ZHC_037

3D structure

PDB id

8ZHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GUUAUCUUU

Length

9 nucleotides

Bulged bases

8ZHC|1|LA|U|1685, 8ZHC|1|LA|U|1686

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZHC|1|LA|G|1679
8ZHC|1|LA|U|1680
8ZHC|1|LA|U|1681
8ZHC|1|LA|A|1682
8ZHC|1|LA|U|1683
8ZHC|1|LA|C|1684
8ZHC|1|LA|U|1685
8ZHC|1|LA|U|1686
8ZHC|1|LA|U|1687

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LT

Large ribosomal subunit protein eL19A

Chain LW

Large ribosomal subunit protein eL22A