HL_8ZHC_072
3D structure
- PDB id
- 8ZHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GGUGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ZHC_072 not in the Motif Atlas
- Homologous match to HL_8OI5_070
- Geometric discrepancy: 0.0679
- The information below is about HL_8OI5_070
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.4
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 399
Unit IDs
8ZHC|1|LB|G|88
8ZHC|1|LB|G|89
8ZHC|1|LB|U|90
8ZHC|1|LB|G|91
8ZHC|1|LB|A|92
8ZHC|1|LB|C|93
Current chains
- Chain LB
- 5S rRNA (121-MER)
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain LI
- Large ribosomal subunit protein uL30A
- Chain LL
- Large ribosomal subunit protein uL16
- Chain LU
- Large ribosomal subunit protein eL20A
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