HL_8ZHC_090
3D structure
- PDB id
- 8ZHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GUACAAUGUAAAUACCUUAAC
- Length
- 21 nucleotides
- Bulged bases
- 8ZHC|1|S2|A|518, 8ZHC|1|S2|C|519, 8ZHC|1|S2|A|525, 8ZHC|1|S2|A|526, 8ZHC|1|S2|A|534
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHC|1|S2|G|516
8ZHC|1|S2|U|517
8ZHC|1|S2|A|518
8ZHC|1|S2|C|519
8ZHC|1|S2|A|520
8ZHC|1|S2|A|521
8ZHC|1|S2|U|522
8ZHC|1|S2|G|523
8ZHC|1|S2|U|524
8ZHC|1|S2|A|525
8ZHC|1|S2|A|526
8ZHC|1|S2|A|527
8ZHC|1|S2|U|528
8ZHC|1|S2|A|529
8ZHC|1|S2|C|530
8ZHC|1|S2|C|531
8ZHC|1|S2|U|532
8ZHC|1|S2|U|533
8ZHC|1|S2|A|534
8ZHC|1|S2|A|535
8ZHC|1|S2|C|536
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain SW
- Small ribosomal subunit protein uS4A
- Chain Sd
- Small ribosomal subunit protein eS24A
Coloring options: