HL_8ZHC_097
3D structure
- PDB id
- 8ZHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GAUGAUCAGAUACCGUC
- Length
- 17 nucleotides
- Bulged bases
- 8ZHC|1|S2|U|1004
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZHC|1|S2|G|994
8ZHC|1|S2|A|995
8ZHC|1|S2|U|996
8ZHC|1|S2|G|997
8ZHC|1|S2|A|998
8ZHC|1|S2|U|999
8ZHC|1|S2|C|1000
8ZHC|1|S2|A|1001
8ZHC|1|S2|G|1002
8ZHC|1|S2|A|1003
8ZHC|1|S2|U|1004
8ZHC|1|S2|A|1005
8ZHC|1|S2|C|1006
8ZHC|1|S2|C|1007
8ZHC|1|S2|G|1008
8ZHC|1|S2|U|1009
8ZHC|1|S2|C|1010
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain SZ
- Small ribosomal subunit protein uS11B
- Chain Se
- Small ribosomal subunit protein eS26B
- Chain Ta
- Transfer RNA; tRNA
- Chain mR
- RNA (5'-R(P*GP*AP*CP*CP*CP*UP*UP*AP*AP*C)-3')
Coloring options: