HL_8ZTV_006

3D structure

PDB id

8ZTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL with RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZTV_006 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.093

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

8ZTV|1|A|A|320
8ZTV|1|A|A|321
8ZTV|1|A|C|322
8ZTV|1|A|U|323
8ZTV|1|A|G|324
8ZTV|1|A|A|325
8ZTV|1|A|G|326
8ZTV|1|A|A|327
8ZTV|1|A|C|328
8ZTV|1|A|A|329
8ZTV|1|A|C|330
8ZTV|1|A|G|331
8ZTV|1|A|G|332
8ZTV|1|A|U|333

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20