HL_8ZTV_044

3D structure

PDB id

8ZTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL with RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

8ZTV|1|a|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZTV_044 not in the Motif Atlas

Homologous match to HL_7A0S_014

Geometric discrepancy: 0.1053

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

8ZTV|1|a|G|410
8ZTV|1|a|G|411
8ZTV|1|a|A|412
8ZTV|1|a|C|413
8ZTV|1|a|C|414
8ZTV|1|a|A|415
8ZTV|1|a|U|416
8ZTV|1|a|C|417

Current chains

Chain a

23S rRNA

Nearby chains