HL_8ZTV_046

3D structure

PDB id

8ZTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL with RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

8ZTV|1|a|C|490

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZTV_046 not in the Motif Atlas

Homologous match to HL_5J7L_148

Geometric discrepancy: 0.0975

The information below is about HL_5J7L_148

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

8ZTV|1|a|C|487
8ZTV|1|a|G|488
8ZTV|1|a|G|489
8ZTV|1|a|C|490
8ZTV|1|a|G|491
8ZTV|1|a|A|492
8ZTV|1|a|G|493

Current chains

Chain a

23S rRNA

Nearby chains

Chain r

50S ribosomal protein L22