HL_8ZTV_056

3D structure

PDB id

8ZTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL with RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZTV_056 not in the Motif Atlas

Geometric match to HL_8B0X_056

Geometric discrepancy: 0.3147

The information below is about HL_8B0X_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67772.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

13

Unit IDs

8ZTV|1|a|C|885
8ZTV|1|a|A|886
8ZTV|1|a|U|887
8ZTV|1|a|C|888
8ZTV|1|a|C|889
8ZTV|1|a|C|890
8ZTV|1|a|G|891

Current chains

Chain a

23S rRNA

Nearby chains

Chain M

30S ribosomal protein S13