HL_8ZTV_093

3D structure

PDB id

8ZTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome arrested by PepNL with RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

8ZTV|1|a|G|2751, 8ZTV|1|a|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZTV_093 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.0816

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

8ZTV|1|a|C|2745
8ZTV|1|a|U|2746
8ZTV|1|a|G|2747
8ZTV|1|a|A|2748
8ZTV|1|a|A|2749
8ZTV|1|a|A|2750
8ZTV|1|a|G|2751
8ZTV|1|a|C|2752
8ZTV|1|a|A|2753
8ZTV|1|a|U|2754
8ZTV|1|a|C|2755
8ZTV|1|a|U|2756
8ZTV|1|a|A|2757
8ZTV|1|a|A|2758
8ZTV|1|a|G|2759

Current chains

Chain a

23S rRNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain g

50S ribosomal protein L6

Chain i

50S ribosomal protein L13