HL_9AX7_058

3D structure

PDB id

9AX7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex (tRNA-fMet M1 + CUG start codon)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9AX7_058 not in the Motif Atlas

Geometric match to HL_5TBW_075

Geometric discrepancy: 0.348

The information below is about HL_5TBW_075

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22523.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

9AX7|1|a|C|885
9AX7|1|a|A|886
9AX7|1|a|U|887
9AX7|1|a|C|888
9AX7|1|a|C|889
9AX7|1|a|C|890
9AX7|1|a|G|891

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain M

30S ribosomal protein S13