HL_9AX8_047
3D structure
- PDB id
- 9AX8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 9AX8|1|A|A|1913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9AX8_047 not in the Motif Atlas
- Homologous match to HL_9DFE_046
- Geometric discrepancy: 0.148
- The information below is about HL_9DFE_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82185.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9AX8|1|A|G|1910
9AX8|1|A|U|1911
9AX8|1|A|A|1912
9AX8|1|A|A|1913
9AX8|1|A|C|1914
9AX8|1|A|U|1915
9AX8|1|A|A|1916
9AX8|1|A|U|1917
9AX8|1|A|A|1918
9AX8|1|A|A|1919
9AX8|1|A|C|1920
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
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