HL_9AX8_065
3D structure
- PDB id
- 9AX8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 9AX8|1|A|G|2751, 9AX8|1|A|C|2755
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9AX8_065 not in the Motif Atlas
- Homologous match to HL_5J7L_199
- Geometric discrepancy: 0.0694
- The information below is about HL_5J7L_199
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_74055.2
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
9AX8|1|A|C|2745
9AX8|1|A|U|2746
9AX8|1|A|G|2747
9AX8|1|A|A|2748
9AX8|1|A|A|2749
9AX8|1|A|A|2750
9AX8|1|A|G|2751
9AX8|1|A|C|2752
9AX8|1|A|A|2753
9AX8|1|A|U|2754
9AX8|1|A|C|2755
9AX8|1|A|U|2756
9AX8|1|A|A|2757
9AX8|1|A|A|2758
9AX8|1|A|G|2759
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain H
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L13
- Chain Y
- 50S ribosomal protein L36
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