HL_9AXU_005

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

UUGGAACA

Length

8 nucleotides

Bulged bases

9AXU|1|2|C|207

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13999.2

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

22

Unit IDs

9AXU|1|2|U|201
9AXU|1|2|U|202
9AXU|1|2|G|203
9AXU|1|2|G|204
9AXU|1|2|A|205
9AXU|1|2|A|206
9AXU|1|2|C|207
9AXU|1|2|A|208

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain P

Large ribosomal subunit protein uL4A

Chain k

Large ribosomal subunit protein uL24

Chain q

Large ribosomal subunit protein eL32A