HL_9AXU_006

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

CAGAG

Length

5 nucleotides

Bulged bases

9AXU|1|2|G|217, 9AXU|1|2|A|218

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

9AXU|1|2|C|215
9AXU|1|2|A|216
9AXU|1|2|G|217
9AXU|1|2|A|218
9AXU|1|2|G|219

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain P

Large ribosomal subunit protein uL4A

Chain k

Large ribosomal subunit protein uL24