HL_9AXU_009

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

GGUAAAUUUC

Length

10 nucleotides

Bulged bases

9AXU|1|2|G|312, 9AXU|1|2|U|313

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_00911.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

9AXU|1|2|G|311
9AXU|1|2|G|312
9AXU|1|2|U|313
9AXU|1|2|A|314
9AXU|1|2|A|315
9AXU|1|2|A|316
9AXU|1|2|U|317
9AXU|1|2|U|318
9AXU|1|2|U|319
9AXU|1|2|C|320

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain 0

Large ribosomal subunit protein eL42

Chain Z

Large ribosomal subunit protein eL15B

Chain m

Large ribosomal subunit protein uL15B

Chain u

Large ribosomal subunit protein eL36B