HL_9AXU_012

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

CUUCGUG

Length

7 nucleotides

Bulged bases

9AXU|1|2|U|625, 9AXU|1|2|U|628

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13184.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

9AXU|1|2|C|623
9AXU|1|2|U|624
9AXU|1|2|U|625
9AXU|1|2|C|626
9AXU|1|2|G|627
9AXU|1|2|U|628
9AXU|1|2|G|629

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain P

Large ribosomal subunit protein uL4A

Chain S

Large ribosomal subunit protein uL30C