HL_9AXU_018

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

9AXU|1|2|U|911, 9AXU|1|2|A|915, 9AXU|1|2|A|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50204.1

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

11

Unit IDs

9AXU|1|2|A|908
9AXU|1|2|C|909
9AXU|1|2|G|910
9AXU|1|2|U|911
9AXU|1|2|G|912
9AXU|1|2|C|913
9AXU|1|2|A|914
9AXU|1|2|A|915
9AXU|1|2|A|916
9AXU|1|2|U|917

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL3A

Chain b

Large ribosomal subunit protein uL22A

Chain v

Large ribosomal subunit protein eL37B