HL_9AXU_056

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

CGAAAUUUG

Length

9 nucleotides

Bulged bases

9AXU|1|2|G|2872

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52651.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

29

Unit IDs

9AXU|1|2|C|2871
9AXU|1|2|G|2872
9AXU|1|2|A|2873
9AXU|1|2|A|2874
9AXU|1|2|A|2875
9AXU|1|2|U|2876
9AXU|1|2|U|2877
9AXU|1|2|U|2878
9AXU|1|2|G|2879

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain 0

Large ribosomal subunit protein eL42

Chain X

Large ribosomal subunit protein eL13

Chain m

Large ribosomal subunit protein uL15B

Chain u

Large ribosomal subunit protein eL36B