HL_9AXU_071
3D structure
- PDB id
- 9AXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Non-translating S. pombe ribosome large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.94 Å
Loop
- Sequence
- CAGCGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_17803.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9AXU|1|4|C|55
9AXU|1|4|A|56
9AXU|1|4|G|57
9AXU|1|4|C|58
9AXU|1|4|G|59
9AXU|1|4|A|60
9AXU|1|4|A|61
9AXU|1|4|A|62
9AXU|1|4|U|63
9AXU|1|4|G|64
Current chains
- Chain 4
- 5.8S ribosomal RNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain j
- Large ribosomal subunit protein uL23A
- Chain t
- Large ribosomal subunit protein uL29
- Chain v
- Large ribosomal subunit protein eL37B
- Chain x
- Large ribosomal subunit protein eL39
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