HL_9AZC_020
3D structure
- PDB id
- 9AZC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human 80S ribosome (Consensus map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.19 Å
Loop
- Sequence
- UCGCACGAAA
- Length
- 10 nucleotides
- Bulged bases
- 9AZC|1|L5|C|1365, 9AZC|1|L5|G|1366, 9AZC|1|L5|C|1367, 9AZC|1|L5|A|1371
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9AZC|1|L5|U|1364
9AZC|1|L5|C|1365
9AZC|1|L5|G|1366
9AZC|1|L5|C|1367
9AZC|1|L5|A|1368
9AZC|1|L5|C|1369
9AZC|1|L5|G|1370
9AZC|1|L5|A|1371
9AZC|1|L5|A|1372
9AZC|1|L5|A|1373
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LC
- 60S ribosomal protein L4
- Chain LL
- Large ribosomal subunit protein eL13
- Chain LN
- 60S ribosomal protein L15
- Chain LY
- 60S ribosomal protein L26
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