Valid loops

No loops found

Problematic loops

#loop idProblemSequence
HL_9AZC_001No text annotation
HL_9AZC_002No text annotation
HL_9AZC_003T-loop with 2 stacked bulged bases
HL_9AZC_004No text annotation
HL_9AZC_005No text annotation
HL_9AZC_006No text annotation
HL_9AZC_007No text annotation
HL_9AZC_008T-loop with 2 bulged bases not stacked
HL_9AZC_009No text annotation
HL_9AZC_010T-loop with unstacked turn
HL_9AZC_011T-loop related
HL_9AZC_012No text annotation
HL_9AZC_013GNRA
HL_9AZC_014GNRA
HL_9AZC_015No text annotation
HL_9AZC_016No text annotation
HL_9AZC_017No text annotation
HL_9AZC_018No text annotation
HL_9AZC_019T-loop with 2 stacked bulged bases
HL_9AZC_020No text annotation
HL_9AZC_021GNRA
HL_9AZC_022No text annotation
HL_9AZC_023No text annotation
HL_9AZC_024No text annotation
HL_9AZC_025GNRA
HL_9AZC_026No text annotation
HL_9AZC_027No text annotation
HL_9AZC_028No text annotation
HL_9AZC_029No text annotation
HL_9AZC_030T-loop related
HL_9AZC_031GNRA
HL_9AZC_032No text annotation
HL_9AZC_033No text annotation
HL_9AZC_034GNRA wlth tandem sheared
HL_9AZC_035No text annotation
HL_9AZC_036GNRA
HL_9AZC_037T-loop with 2 stacked bulged bases
HL_9AZC_038Pseudoknot geometry with 3' bulge
HL_9AZC_039GNRA variation
HL_9AZC_040No text annotation
HL_9AZC_041No text annotation
HL_9AZC_042GNRA
HL_9AZC_043GNRA
HL_9AZC_044Pseudoknot geometry
HL_9AZC_045Other HL
HL_9AZC_046No text annotation
HL_9AZC_047No text annotation
HL_9AZC_048No text annotation
HL_9AZC_049GNRA
HL_9AZC_050UNCG
HL_9AZC_051No text annotation
HL_9AZC_052No text annotation
HL_9AZC_053No text annotation
HL_9AZC_054No text annotation
HL_9AZC_055GNRA
HL_9AZC_056GNRA
HL_9AZC_057No text annotation
HL_9AZC_058No text annotation
HL_9AZC_059No text annotation
HL_9AZC_060No text annotation
HL_9AZC_061No text annotation
HL_9AZC_062No text annotation
HL_9AZC_063No text annotation
HL_9AZC_064No text annotation
HL_9AZC_065No text annotation
HL_9AZC_066Pseudoknot geometry
HL_9AZC_067No text annotation
HL_9AZC_068GNRA
HL_9AZC_069No text annotation
HL_9AZC_070No text annotation
HL_9AZC_071GNRA variation
HL_9AZC_072No text annotation
HL_9AZC_073GNRA
HL_9AZC_074GNRA
HL_9AZC_075No text annotation
HL_9AZC_076No text annotation
HL_9AZC_077No text annotation
HL_9AZC_078No text annotation
HL_9AZC_079No text annotation
HL_9AZC_080No text annotation
HL_9AZC_081No text annotation
HL_9AZC_082No text annotation
HL_9AZC_083GNRA
HL_9AZC_084No text annotation
HL_9AZC_085No text annotation
HL_9AZC_086No text annotation
HL_9AZC_087No text annotation
HL_9AZC_088No text annotation
HL_9AZC_089tRNA anticodon loop
HL_9AZC_090T-loop with 2 stacked bulged bases
HL_9AZC_091No text annotation
HL_9AZC_092No text annotation
HL_9AZC_093GNRA related
HL_9AZC_094No text annotation
HL_9AZC_095T-loop with 1 bulged base
HL_9AZC_096No text annotation
HL_9AZC_097No text annotation
HL_9AZC_098GNRA variation
HL_9AZC_099No text annotation
HL_9AZC_100UNCG
HL_9AZC_101No text annotation
HL_9AZC_102No text annotation
HL_9AZC_103No text annotation
HL_9AZC_104No text annotation
HL_9AZC_105No text annotation
HL_9AZC_106No text annotation
HL_9AZC_107No text annotation
HL_9AZC_108No text annotation
HL_9AZC_109No text annotation
HL_9AZC_110GNRA
HL_9AZC_111No text annotation
HL_9AZC_112No text annotation
HL_9AZC_113GNRA
HL_9AZC_114GNRA
HL_9AZC_115No text annotation
HL_9AZC_116GNRA wlth extra near cWW
HL_9AZC_117No text annotation
HL_9AZC_118T-loop related
HL_9AZC_119No text annotation
HL_9AZC_120No text annotation
HL_9AZC_121GNRA
HL_9AZC_122No text annotation
HL_9AZC_123T-loop with 1 bulged base
HL_9AZC_124No text annotation
HL_9AZC_125GNRA variation

Valid loops

No loops found

Problematic loops

#loop idProblemSequence
IL_9AZC_001No text annotation
IL_9AZC_002No text annotation
IL_9AZC_003Single bulged C
IL_9AZC_004Single bulged U
IL_9AZC_005Isolated non-canonical cWW pair
IL_9AZC_006Single stack bend
IL_9AZC_007tSH-tHW-tHH-tHS
IL_9AZC_0088x7 Sarcin-Ricin; G-bulge
IL_9AZC_009No text annotation
IL_9AZC_010Single bulged C
IL_9AZC_011No text annotation
IL_9AZC_012Single stack bend
IL_9AZC_013No text annotation
IL_9AZC_014Single bulged C
IL_9AZC_015No text annotation
IL_9AZC_016Minor groove platform
IL_9AZC_017Single bulged A
IL_9AZC_018No text annotation
IL_9AZC_019No text annotation
IL_9AZC_020No text annotation
IL_9AZC_021No text annotation
IL_9AZC_022Single bulged C
IL_9AZC_023Isolated non-canonical cWW pair
IL_9AZC_024No text annotation
IL_9AZC_025Multiple bulged bases
IL_9AZC_026Minor groove platform
IL_9AZC_027No text annotation
IL_9AZC_028No text annotation
IL_9AZC_029No text annotation
IL_9AZC_030Single bulged A
IL_9AZC_031No text annotation
IL_9AZC_032Single bulged G
IL_9AZC_033Multiple bulged bases
IL_9AZC_034No text annotation
IL_9AZC_035No text annotation
IL_9AZC_036No text annotation
IL_9AZC_037No text annotation
IL_9AZC_038No text annotation
IL_9AZC_039No text annotation
IL_9AZC_040Single bulged A
IL_9AZC_041No text annotation
IL_9AZC_042Isolated cWH basepair
IL_9AZC_043Single bulged C
IL_9AZC_044No text annotation
IL_9AZC_045Isolated non-canonical cWW pair
IL_9AZC_046No text annotation
IL_9AZC_047No text annotation
IL_9AZC_048No text annotation
IL_9AZC_049Single bulged A
IL_9AZC_050No text annotation
IL_9AZC_051Double sheared
IL_9AZC_052Single bulged A
IL_9AZC_053Single stack bend
IL_9AZC_054No text annotation
IL_9AZC_055Isolated non-canonical cWW pair
IL_9AZC_056No text annotation
IL_9AZC_057Single bulged A
IL_9AZC_058No text annotation
IL_9AZC_059Triple sheared
IL_9AZC_060No text annotation
IL_9AZC_061Single bulged U
IL_9AZC_062No text annotation
IL_9AZC_063Isolated non-canonical cWW pair
IL_9AZC_064No text annotation
IL_9AZC_065No text annotation
IL_9AZC_066No text annotation
IL_9AZC_067No text annotation
IL_9AZC_068Minor groove platform
IL_9AZC_069C-loop with bulged stacked A's
IL_9AZC_070Tandem non-canonical cWW pairs
IL_9AZC_071Isolated non-canonical cWW pair
IL_9AZC_072No text annotation
IL_9AZC_073No text annotation
IL_9AZC_074Single bulged A
IL_9AZC_075Isolated non-canonical cWW pair
IL_9AZC_076No text annotation
IL_9AZC_077UAA/GAN
IL_9AZC_078SSU/LSU pseudoknot
IL_9AZC_079Single bulged G
IL_9AZC_080No text annotation
IL_9AZC_081No text annotation
IL_9AZC_082No text annotation
IL_9AZC_083Single bulged U
IL_9AZC_084Kink-turn
IL_9AZC_085No text annotation
IL_9AZC_086No text annotation
IL_9AZC_087Single bulged C
IL_9AZC_088No text annotation
IL_9AZC_089No text annotation
IL_9AZC_090Single bulged A
IL_9AZC_091Kink-turn
IL_9AZC_092Single bulged A
IL_9AZC_0937x6 Sarcin-Ricin; G-bulge
IL_9AZC_094C-loop
IL_9AZC_095UAA/GAN
IL_9AZC_096No text annotation
IL_9AZC_097Tandem non-canonical cWW pairs
IL_9AZC_098No text annotation
IL_9AZC_099No text annotation
IL_9AZC_100Triple sheared
IL_9AZC_101Single bulged C
IL_9AZC_102Single stack bend
IL_9AZC_103Isolated tHS basepair with bulges
IL_9AZC_104Single bulged G
IL_9AZC_105No text annotation
IL_9AZC_106No text annotation
IL_9AZC_107No text annotation
IL_9AZC_108Major groove platform; stack outside cWW
IL_9AZC_109No text annotation
IL_9AZC_110No text annotation
IL_9AZC_111No text annotation
IL_9AZC_112Isolated non-canonical cWW pair
IL_9AZC_113No text annotation
IL_9AZC_114No text annotation
IL_9AZC_115No text annotation
IL_9AZC_116Single bulged A
IL_9AZC_117No text annotation
IL_9AZC_118Minor groove platform, major groove intercalation
IL_9AZC_119No text annotation
IL_9AZC_120Single stack bend
IL_9AZC_121No text annotation
IL_9AZC_122No text annotation
IL_9AZC_123No text annotation
IL_9AZC_124No text annotation
IL_9AZC_125No text annotation
IL_9AZC_126No text annotation
IL_9AZC_127No text annotation
IL_9AZC_128Minor groove platform
IL_9AZC_129No text annotation
IL_9AZC_130No text annotation
IL_9AZC_131No text annotation
IL_9AZC_132No text annotation
IL_9AZC_133No text annotation
IL_9AZC_134Single bulged A
IL_9AZC_135Tandem non-canonical cWW pairs
IL_9AZC_136Single stack bend
IL_9AZC_137Major groove platform
IL_9AZC_138Isolated non-canonical cWW pair
IL_9AZC_139No text annotation
IL_9AZC_140No text annotation
IL_9AZC_141Double sheared with non-canonical cWW
IL_9AZC_142No text annotation
IL_9AZC_143Isolated non-canonical cWW with bulges
IL_9AZC_144No text annotation
IL_9AZC_145Isolated non-canonical cWW pair
IL_9AZC_146No text annotation
IL_9AZC_147No text annotation
IL_9AZC_148Isolated non-canonical cWW pair
IL_9AZC_149Single bulged A
IL_9AZC_150Isolated cWH basepair
IL_9AZC_151Double sheared
IL_9AZC_152Isolated non-canonical cWW pair
IL_9AZC_1538x7 Sarcin-Ricin; G-bulge
IL_9AZC_154No text annotation
IL_9AZC_155No text annotation
IL_9AZC_156Isolated cWH basepair
IL_9AZC_157No text annotation
IL_9AZC_158UAA/GAN
IL_9AZC_159No text annotation
IL_9AZC_160Tandem non-canonical cWW pairs
IL_9AZC_161No text annotation
IL_9AZC_162No text annotation
IL_9AZC_163Isolated non-canonical cWW pair
IL_9AZC_164No text annotation
IL_9AZC_165Triple non-canonical cWW pairs
IL_9AZC_166No text annotation
IL_9AZC_167Single stack bend
IL_9AZC_168Single bulged C
IL_9AZC_169Tandem non-canonical cWW pairs
IL_9AZC_170Isolated non-canonical cWW pair
IL_9AZC_171No text annotation
IL_9AZC_172No text annotation
IL_9AZC_173No text annotation
IL_9AZC_174No text annotation
IL_9AZC_175Double sheared; A in syn
IL_9AZC_176Single bulged A
IL_9AZC_177No text annotation
IL_9AZC_178No text annotation
IL_9AZC_179No text annotation
IL_9AZC_1808x7 Sarcin-Ricin; G-bulge
IL_9AZC_181Isolated non-canonical cWW pair
IL_9AZC_182Isolated non-canonical cWW pair
IL_9AZC_183Isolated non-canonical cWW with bulges
IL_9AZC_184No text annotation
IL_9AZC_185Isolated non-canonical cWW pair
IL_9AZC_186Isolated non-canonical cWW pair
IL_9AZC_187Double sheared
IL_9AZC_188No text annotation
IL_9AZC_189Minor groove platform
IL_9AZC_190No text annotation
IL_9AZC_191No text annotation
IL_9AZC_192Isolated non-canonical cWW pair
IL_9AZC_193Isolated non-canonical cWW pair
IL_9AZC_194No text annotation
IL_9AZC_195No text annotation
IL_9AZC_196Minor groove platform
IL_9AZC_197No text annotation
IL_9AZC_198No text annotation
IL_9AZC_199No text annotation
IL_9AZC_200Triple sheared
IL_9AZC_201No text annotation
IL_9AZC_202No text annotation
IL_9AZC_203Single bulged A
IL_9AZC_204Single stack bend
IL_9AZC_205Kink-turn with non-sequential stacking
IL_9AZC_206No text annotation
IL_9AZC_207No text annotation
IL_9AZC_208Isolated cWH basepair
IL_9AZC_209No text annotation
IL_9AZC_210Single bulged U
IL_9AZC_211C-loop
IL_9AZC_212Single bulged G
IL_9AZC_213Isolated non-canonical cWW pair
IL_9AZC_214No text annotation
IL_9AZC_215Major groove intercalation
IL_9AZC_216Tandem non-canonical cWW pairs
IL_9AZC_217SSU/LSU pseudoknot
IL_9AZC_218No text annotation
IL_9AZC_219No text annotation
IL_9AZC_220Isolated non-canonical cWW pair
IL_9AZC_221No text annotation
IL_9AZC_222Isolated non-canonical cWW pair
IL_9AZC_223tSH-tHW-tHS
IL_9AZC_224No text annotation
IL_9AZC_225Isolated non-canonical cWW pair
IL_9AZC_226No text annotation
IL_9AZC_227Single stack bend
IL_9AZC_228Isolated non-canonical cWW pair
IL_9AZC_229No text annotation
IL_9AZC_230Major groove platform; stack outside cWW
IL_9AZC_231Single bulged U
IL_9AZC_232Tandem non-canonical cWW pairs
IL_9AZC_233Tandem non-canonical cWW pairs
IL_9AZC_234Tandem non-canonical cWW pairs
IL_9AZC_235Kink-turn
IL_9AZC_236No text annotation
IL_9AZC_237tSH-tHW-tHS
IL_9AZC_238No text annotation
IL_9AZC_239Tandem non-canonical cWW pairs
IL_9AZC_240Isolated cWH basepair
IL_9AZC_241Minor groove platform
IL_9AZC_2428x6 Sarcin-Ricin with inserted Y; G-bulge
IL_9AZC_243Single bulged A
IL_9AZC_244No text annotation
IL_9AZC_245C-loop
IL_9AZC_246Isolated non-canonical cWW pair
IL_9AZC_247Minor groove platform
IL_9AZC_248Isolated non-canonical cWW pair
IL_9AZC_249No text annotation
IL_9AZC_250No text annotation
IL_9AZC_251No text annotation
IL_9AZC_252No text annotation
IL_9AZC_253No text annotation
IL_9AZC_254No text annotation
IL_9AZC_255No text annotation
IL_9AZC_256No text annotation
IL_9AZC_257Single bulged A
IL_9AZC_258Isolated cWH basepair
IL_9AZC_259Minor groove platform
IL_9AZC_260Tandem non-canonical cWW pairs
IL_9AZC_261No text annotation
IL_9AZC_262No text annotation
IL_9AZC_263Single bulged G
IL_9AZC_264Isolated non-canonical cWW pair
IL_9AZC_265No text annotation
IL_9AZC_266No text annotation
IL_9AZC_267Isolated non-canonical cWW pair
IL_9AZC_268No text annotation
IL_9AZC_269No text annotation
IL_9AZC_270No text annotation
IL_9AZC_271Isolated non-canonical cWW pair
IL_9AZC_272No text annotation
IL_9AZC_273Isolated non-canonical cWW pair
IL_9AZC_274Double sheared
IL_9AZC_275Single bulged U
IL_9AZC_276Single stack bend
IL_9AZC_277Isolated non-canonical cWW pair
IL_9AZC_278Double sheared
IL_9AZC_279Isolated non-canonical cWW pair
IL_9AZC_280Triple sheared
IL_9AZC_281No text annotation

Valid loops

No loops found

Problematic loops

#loop idProblemSequence
J3_9AZC_001No text annotation
J3_9AZC_002No text annotation
J3_9AZC_003No text annotation
J3_9AZC_004No text annotation
J3_9AZC_005No text annotation
J3_9AZC_006No text annotation
J3_9AZC_007No text annotation
J3_9AZC_008No text annotation
J3_9AZC_009No text annotation
J3_9AZC_010No text annotation
J3_9AZC_011No text annotation
J3_9AZC_012No text annotation
J3_9AZC_013No text annotation
J3_9AZC_014No text annotation
J3_9AZC_015No text annotation
J3_9AZC_016No text annotation
J3_9AZC_017No text annotation
J3_9AZC_018No text annotation
J3_9AZC_019Kink-turn 3-way junction
J3_9AZC_020No text annotation
J3_9AZC_021No text annotation
J3_9AZC_022No text annotation
J3_9AZC_023No text annotation
J3_9AZC_024No text annotation
J3_9AZC_025No text annotation
J3_9AZC_026No text annotation
J3_9AZC_027No text annotation
J3_9AZC_028No text annotation
J3_9AZC_029No text annotation
J3_9AZC_030No text annotation
J3_9AZC_031No text annotation
J3_9AZC_032No text annotation
J3_9AZC_033No text annotation
J3_9AZC_034No text annotation
J3_9AZC_035No text annotation
J3_9AZC_036No text annotation
J3_9AZC_037No text annotation
J3_9AZC_038No text annotation
J3_9AZC_039No text annotation
J3_9AZC_040No text annotation
J3_9AZC_041No text annotation
J3_9AZC_042No text annotation
J4_9AZC_001tRNA junction
J4_9AZC_002No text annotation
J4_9AZC_003No text annotation
J4_9AZC_004No text annotation
J4_9AZC_005No text annotation
J4_9AZC_006No text annotation
J4_9AZC_007No text annotation
J4_9AZC_008No text annotation
J4_9AZC_009No text annotation
J4_9AZC_010No text annotation
J4_9AZC_011No text annotation
J4_9AZC_012No text annotation
J4_9AZC_013tRNA junction
J4_9AZC_014No text annotation
J4_9AZC_015No text annotation
J4_9AZC_016No text annotation
J5_9AZC_001No text annotation
J5_9AZC_002No text annotation
J5_9AZC_003No text annotation
J5_9AZC_004No text annotation
J5_9AZC_005No text annotation
J5_9AZC_006No text annotation
J5_9AZC_007No text annotation
J5_9AZC_008No text annotation
J6_9AZC_001No text annotation
J6_9AZC_002No text annotation
J6_9AZC_003No text annotation
J7_9AZC_001No text annotation

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