HL_9AZC_097

3D structure

PDB id

9AZC (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 80S ribosome (Consensus map)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

9AZC|1|S2|G|385

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZC|1|S2|G|377
9AZC|1|S2|U|378
9AZC|1|S2|C|379
9AZC|1|S2|G|380
9AZC|1|S2|C|381
9AZC|1|S2|C|382
9AZC|1|S2|G|383
9AZC|1|S2|U|384
9AZC|1|S2|G|385
9AZC|1|S2|C|386
9AZC|1|S2|C|387

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SI

40S ribosomal protein S8

Chain SL

40S ribosomal protein S11