HL_9AZC_102

3D structure

PDB id

9AZC (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human 80S ribosome (Consensus map)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.19 Å

Loop

Sequence

CUUUCG

Length

6 nucleotides

Bulged bases

9AZC|1|S2|U|540, 9AZC|1|S2|U|541

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZC|1|S2|C|539
9AZC|1|S2|U|540
9AZC|1|S2|U|541
9AZC|1|S2|U|542
9AZC|1|S2|C|543
9AZC|1|S2|G|544

Current chains

Chain S2

18S rRNA

Nearby chains