HL_9AZC_118
3D structure
- PDB id
- 9AZC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human 80S ribosome (Consensus map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.19 Å
Loop
- Sequence
- GUUAAUUC
- Length
- 8 nucleotides
- Bulged bases
- 9AZC|1|S2|U|1371
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9AZC_118 not in the Motif Atlas
- Homologous match to HL_8CRE_219
- Geometric discrepancy: 0.1285
- The information below is about HL_8CRE_219
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_63894.2
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 19
Unit IDs
9AZC|1|S2|G|1366
9AZC|1|S2|U|1367
9AZC|1|S2|U|1368
9AZC|1|S2|A|1369
9AZC|1|S2|A|1370
9AZC|1|S2|U|1371
9AZC|1|S2|U|1372
9AZC|1|S2|C|1373
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SR
- 40S ribosomal protein S17
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