HL_9AZN_081

3D structure

PDB id

9AZN (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human A/P-P/E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

CUCCCUCG

Length

8 nucleotides

Bulged bases

9AZN|1|L5|C|5023, 9AZN|1|L5|C|5024, 9AZN|1|L5|U|5026

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZN|1|L5|C|5021
9AZN|1|L5|U|5022
9AZN|1|L5|C|5023
9AZN|1|L5|C|5024
9AZN|1|L5|C|5025
9AZN|1|L5|U|5026
9AZN|1|L5|C|5027
9AZN|1|L5|G|5028

Current chains

Chain L5

28S rRNA

Nearby chains

Chain SI

40S ribosomal protein S8