HL_9AZN_108

3D structure

PDB id

9AZN (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human A/P-P/E state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

CCCGAGCCG

Length

9 nucleotides

Bulged bases

9AZN|1|S3|G|836, 9AZN|1|S3|G|838, 9AZN|1|S3|C|840

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9AZN|1|S3|C|833
9AZN|1|S3|C|834
9AZN|1|S3|C|835
9AZN|1|S3|G|836
9AZN|1|S3|A|837
9AZN|1|S3|G|838
9AZN|1|S3|C|839
9AZN|1|S3|C|840
9AZN|1|S3|G|841

Current chains

Chain S3

18S rRNA

Nearby chains

Chain SE

Small ribosomal subunit protein eS4, X isoform

Chain SJ

40S ribosomal protein S9

Chain SY

40S ribosomal protein S24