HL_9B0N_024
3D structure
- PDB id
- 9B0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human Post-eEF1A-AT-P state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.92 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B0N_024 not in the Motif Atlas
- Homologous match to HL_8CRE_018
- Geometric discrepancy: 0.1498
- The information below is about HL_8CRE_018
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
9B0N|1|L5|G|1561
9B0N|1|L5|G|1562
9B0N|1|L5|A|1563
9B0N|1|L5|A|1564
9B0N|1|L5|A|1565
9B0N|1|L5|C|1566
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain Lp
- 60S ribosomal protein L37a
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SL
- 40S ribosomal protein S11
- Chain SN
- 40S ribosomal protein S13
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