HL_9B0Q_001
3D structure
- PDB id
- 9B0Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human top-back di-ribosome structure (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCUAACACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B0Q_001 not in the Motif Atlas
- Homologous match to HL_4V8N_144
- Geometric discrepancy: 0.1926
- The information below is about HL_4V8N_144
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9B0Q|1|AP|C|31
9B0Q|1|AP|C|32
9B0Q|1|AP|U|33
9B0Q|1|AP|A|34
9B0Q|1|AP|A|35
9B0Q|1|AP|C|36
9B0Q|1|AP|A|37
9B0Q|1|AP|C|38
9B0Q|1|AP|G|39
Current chains
- Chain AP
- A/P site tRNA [Homo sapiens]
Nearby chains
- Chain CB
- Elongation factor 2
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SP
- Small ribosomal subunit protein uS19
- Chain SX
- 40S ribosomal protein S23
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