HL_9B0S_008
3D structure
- PDB id
- 9B0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human top-top di-ribosome structure (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B0S_008 not in the Motif Atlas
- Homologous match to HL_8CRE_003
- Geometric discrepancy: 0.1491
- The information below is about HL_8CRE_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37369.2
- Basepair signature
- cWW-tSH-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9B0S|1|L5|C|89
9B0S|1|L5|G|90
9B0S|1|L5|G|91
9B0S|1|L5|C|92
9B0S|1|L5|G|93
9B0S|1|L5|A|94
9B0S|1|L5|G|95
Current chains
- Chain L5
- 28S rRNA [Homo sapiens]
Nearby chains
- Chain Et
- Transfer RNA; tRNA
- Chain LL
- Large ribosomal subunit protein eL13
- Chain LQ
- 60S ribosomal protein L18
- Chain La
- 60S ribosomal protein L27a
- Chain Lo
- 60S ribosomal protein L36a
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