HL_9B0S_091
3D structure
- PDB id
- 9B0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human top-top di-ribosome structure (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUAGGGUAUC
- Length
- 10 nucleotides
- Bulged bases
- 9B0S|1|Pt|G|18, 9B0S|1|Pt|G|19, 9B0S|1|Pt|U|20|||A
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B0S_091 not in the Motif Atlas
- Homologous match to HL_4JYZ_001
- Geometric discrepancy: 0.3048
- The information below is about HL_4JYZ_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_40252.4
- Basepair signature
- cWW-tSH-cWS-F
- Number of instances in this motif group
- 5
Unit IDs
9B0S|1|Pt|G|12
9B0S|1|Pt|U|13
9B0S|1|Pt|A|14
9B0S|1|Pt|G|15
9B0S|1|Pt|G|18
9B0S|1|Pt|G|19
9B0S|1|Pt|U|20|||A
9B0S|1|Pt|A|21
9B0S|1|Pt|U|22
9B0S|1|Pt|C|23
Current chains
- Chain Pt
- P site tRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain LJ
- 60S ribosomal protein L11
- Chain Lo
- 60S ribosomal protein L36a
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