HL_9B0S_192
3D structure
- PDB id
- 9B0S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human top-top di-ribosome structure (Composite map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 9B0S|1|l5|G|4195
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B0S_192 not in the Motif Atlas
- Homologous match to HL_8P9A_165
- Geometric discrepancy: 0.112
- The information below is about HL_8P9A_165
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9B0S|1|l5|C|4193
9B0S|1|l5|U|4194
9B0S|1|l5|G|4195
9B0S|1|l5|G|4196
9B0S|1|l5|G|4197
9B0S|1|l5|G|4198
9B0S|1|l5|C|4199
9B0S|1|l5|G|4200
9B0S|1|l5|G|4201
Current chains
- Chain l5
- 28S rRNA [Homo sapiens]
Nearby chains
- Chain lI
- Ribosomal protein uL16-like
- Chain lb
- Large ribosomal subunit protein eL29
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