HL_9B0W_066
3D structure
- PDB id
- 9B0W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human eEF2-A/P-P/E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- GACAGAAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B0W_066 not in the Motif Atlas
- Homologous match to HL_8CRE_055
- Geometric discrepancy: 0.1059
- The information below is about HL_8CRE_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50860.2
- Basepair signature
- cWW-F-cWH-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9B0W|1|L5|G|4250
9B0W|1|L5|A|4251
9B0W|1|L5|C|4252
9B0W|1|L5|A|4253
9B0W|1|L5|G|4254
9B0W|1|L5|A|4255
9B0W|1|L5|A|4256
9B0W|1|L5|A|4257
9B0W|1|L5|C|4258
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain AP
- Transfer RNA; tRNA
- Chain LJ
- 60S ribosomal protein L11
Coloring options: