HL_9B0W_071
3D structure
- PDB id
- 9B0W (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human eEF2-A/P-P/E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- CGUUCAUAG
- Length
- 9 nucleotides
- Bulged bases
- 9B0W|1|L5|U|4419
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B0W_071 not in the Motif Atlas
- Homologous match to HL_8P9A_172
- Geometric discrepancy: 0.2712
- The information below is about HL_8P9A_172
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9B0W|1|L5|C|4417
9B0W|1|L5|G|4418
9B0W|1|L5|U|4419
9B0W|1|L5|U|4420
9B0W|1|L5|C|4421
9B0W|1|L5|A|4422
9B0W|1|L5|U|4423
9B0W|1|L5|A|4424
9B0W|1|L5|G|4425
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CB
- eEF2
- Chain LI
- 60S ribosomal protein L10-like
- Chain Lm
- Large ribosomal subunit protein eL40
Coloring options: