3D structure

PDB id
9B11 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human unrotated hibernating without CCDC124 state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
CCUUCGCGGG
Length
10 nucleotides
Bulged bases
9B11|1|S2|U|197
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9B11|1|S2|C|195
9B11|1|S2|C|196
9B11|1|S2|U|197
9B11|1|S2|U|198
9B11|1|S2|C|199
9B11|1|S2|G|200
9B11|1|S2|C|201
9B11|1|S2|G|202
9B11|1|S2|G|203
9B11|1|S2|G|204

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SI
40S ribosomal protein S8

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1666 s