3D structure

PDB id
9B11 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human unrotated hibernating without CCDC124 state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.77 Å

Loop

Sequence
UCUCGGCCGGGGCCCGAA
Length
18 nucleotides
Bulged bases
9B11|1|S2|G|752, 9B11|1|S2|C|785, 9B11|1|S2|G|786, 9B11|1|S2|G|787, 9B11|1|S2|C|790, 9B11|1|S2|C|791, 9B11|1|S2|C|792
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9B11|1|S2|U|747
9B11|1|S2|C|748
9B11|1|S2|U|749
9B11|1|S2|C|750
9B11|1|S2|G|751
9B11|1|S2|G|752
9B11|1|S2|C|753
9B11|1|S2|C|785
9B11|1|S2|G|786
9B11|1|S2|G|787
9B11|1|S2|G|788
9B11|1|S2|G|789
9B11|1|S2|C|790
9B11|1|S2|C|791
9B11|1|S2|C|792
9B11|1|S2|G|793
9B11|1|S2|A|794
9B11|1|S2|A|795

Current chains

Chain S2
18S rRNA

Nearby chains

Chain SE
Small ribosomal subunit protein eS4, X isoform
Chain SG
40S ribosomal protein S6
Chain SH
40S ribosomal protein S7

Coloring options:

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