HL_9B24_056

3D structure

PDB id

9B24 (explore in PDB, NAKB, or RNA 3D Hub)

Description

WT strain gidB mutant mycobacterial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

AAGAGU

Length

6 nucleotides

Bulged bases

9B24|1|Y|A|758, 9B24|1|Y|G|759

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9B24_056 not in the Motif Atlas

Geometric match to HL_8C3A_221

Geometric discrepancy: 0.2305

The information below is about HL_8C3A_221

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.3

Basepair signature

cWW-F-F

Number of instances in this motif group

23

Unit IDs

9B24|1|Y|A|755
9B24|1|Y|A|756
9B24|1|Y|G|757
9B24|1|Y|A|758
9B24|1|Y|G|759
9B24|1|Y|U|760

Current chains

Chain Y

23S rRNA

Nearby chains

Chain s

Large ribosomal subunit protein bL27