HL_9B4Z_076

3D structure

PDB id

9B4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9B4Z|1|BA|A|1535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9B4Z_076 not in the Motif Atlas

Geometric match to HL_1YLS_001

Geometric discrepancy: 0.1982

The information below is about HL_1YLS_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

9B4Z|1|BA|C|1533
9B4Z|1|BA|U|1534
9B4Z|1|BA|A|1535
9B4Z|1|BA|C|1536
9B4Z|1|BA|G|1537
9B4Z|1|BA|G|1538

Current chains

Chain BA

23S ribosomal RNA

Nearby chains