HL_9B50_005

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9B50|1|AA|U|209, 9B50|1|AA|C|210

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9B50_005 not in the Motif Atlas

Geometric match to HL_7D81_001

Geometric discrepancy: 0.3211

The information below is about HL_7D81_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50006.5

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

9B50|1|AA|C|207
9B50|1|AA|U|208
9B50|1|AA|U|209
9B50|1|AA|C|210
9B50|1|AA|G|211
9B50|1|AA|G|212

Current chains

Chain AA

16S ribosomal RNA

Nearby chains