HL_9B50_020
3D structure
- PDB id
- 9B50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGCAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B50_020 not in the Motif Atlas
- Geometric match to HL_8P9A_214
- Geometric discrepancy: 0.0612
- The information below is about HL_8P9A_214
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 335
Unit IDs
9B50|1|AA|C|897
9B50|1|AA|G|898
9B50|1|AA|C|899
9B50|1|AA|A|900
9B50|1|AA|A|901
9B50|1|AA|G|902
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain BA
- 23S ribosomal RNA
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