HL_9B50_033
3D structure
- PDB id
- 9B50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UGCUAAUCUG
- Length
- 10 nucleotides
- Bulged bases
- 9B50|1|BA|C|61
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B50_033 not in the Motif Atlas
- Geometric match to HL_8B0X_033
- Geometric discrepancy: 0.0771
- The information below is about HL_8B0X_033
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35677.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9B50|1|BA|U|59
9B50|1|BA|G|60
9B50|1|BA|C|61
9B50|1|BA|U|62
9B50|1|BA|A|63
9B50|1|BA|A|64
9B50|1|BA|U|65
9B50|1|BA|C|66
9B50|1|BA|U|67
9B50|1|BA|G|68
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BT
- 50S ribosomal protein L23
- Chain BY
- 50S ribosomal protein L29
Coloring options: