HL_9B50_084
3D structure
- PDB id
- 9B50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 9B50|1|BA|G|2250
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B50_084 not in the Motif Atlas
- Geometric match to HL_8B0X_080
- Geometric discrepancy: 0.0676
- The information below is about HL_8B0X_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9B50|1|BA|C|2248
9B50|1|BA|U|2249
9B50|1|BA|G|2250
9B50|1|BA|G|2251
9B50|1|BA|G|2252
9B50|1|BA|G|2253
9B50|1|BA|C|2254
9B50|1|BA|G|2255
9B50|1|BA|G|2256
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BM
- 50S ribosomal protein L16
- Chain BW
- 50S ribosomal protein L27
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