HL_9B50_098

3D structure

PDB id

9B50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

9B50|1|BA|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9B50_098 not in the Motif Atlas

Geometric match to HL_8P9A_196

Geometric discrepancy: 0.1018

The information below is about HL_8P9A_196

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

9B50|1|BA|U|2796
9B50|1|BA|U|2797
9B50|1|BA|U|2798
9B50|1|BA|A|2799

Current chains

Chain BA

23S ribosomal RNA

Nearby chains