HL_9B50_102
3D structure
- PDB id
- 9B50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CAUGCCG
- Length
- 7 nucleotides
- Bulged bases
- 9B50|1|BB|G|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B50_102 not in the Motif Atlas
- Geometric match to HL_8B0X_097
- Geometric discrepancy: 0.1172
- The information below is about HL_8B0X_097
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59381.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9B50|1|BB|C|38
9B50|1|BB|A|39
9B50|1|BB|U|40
9B50|1|BB|G|41
9B50|1|BB|C|42
9B50|1|BB|C|43
9B50|1|BB|G|44
Current chains
- Chain BB
- 5S ribosomal RNA
Nearby chains
- Chain B5
- 50S ribosomal protein L31
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BF
- 50S ribosomal protein L5
- Chain BO
- 50S ribosomal protein L18
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