HL_9B51_105

3D structure

PDB id

9B51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

9B51|1|BA|G|2751, 9B51|1|BA|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9B51_105 not in the Motif Atlas

Geometric match to HL_8B0X_093

Geometric discrepancy: 0.0503

The information below is about HL_8B0X_093

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53269.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

10

Unit IDs

9B51|1|BA|C|2745
9B51|1|BA|U|2746
9B51|1|BA|G|2747
9B51|1|BA|A|2748
9B51|1|BA|A|2749
9B51|1|BA|A|2750
9B51|1|BA|G|2751
9B51|1|BA|C|2752
9B51|1|BA|A|2753
9B51|1|BA|U|2754
9B51|1|BA|C|2755
9B51|1|BA|U|2756
9B51|1|BA|A|2757
9B51|1|BA|A|2758
9B51|1|BA|G|2759

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BG

50S ribosomal protein L6

Chain BJ

50S ribosomal protein L13