HL_9BDN_007

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

9BDN|1|A18S|G|385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDN|1|A18S|G|377
9BDN|1|A18S|U|378
9BDN|1|A18S|C|379
9BDN|1|A18S|G|380
9BDN|1|A18S|C|381
9BDN|1|A18S|C|382
9BDN|1|A18S|G|383
9BDN|1|A18S|U|384
9BDN|1|A18S|G|385
9BDN|1|A18S|C|386
9BDN|1|A18S|C|387

Current chains

Chain A18S

18S rRNA

Nearby chains

Chain AS08

40S ribosomal protein S8

Chain AS11

40S ribosomal protein S11