HL_9BDN_081

3D structure

PDB id

9BDN (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with angiogenin and tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UCA

Length

3 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9BDN_081 not in the Motif Atlas

Homologous match to HL_5TBW_044

Geometric discrepancy: 0.3861

The information below is about HL_5TBW_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.1

Basepair signature

cWW

Number of instances in this motif group

4

Unit IDs

9BDN|1|A28S|U|2900
9BDN|1|A28S|C|3598
9BDN|1|A28S|A|3599

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL19

60S ribosomal protein L19

Chain AS08

40S ribosomal protein S8