HL_9BH5_026

3D structure

PDB id

9BH5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High-resolution C. elegans 80S ribosome structure - class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

UAUUGACAGCAA

Length

12 nucleotides

Bulged bases

9BH5|1|A5|U|1273

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BH5|1|A5|U|1270
9BH5|1|A5|A|1271
9BH5|1|A5|U|1272
9BH5|1|A5|U|1273
9BH5|1|A5|G|1274
9BH5|1|A5|A|1275
9BH5|1|A5|C|1276
9BH5|1|A5|A|1277
9BH5|1|A5|G|1278
9BH5|1|A5|C|1279
9BH5|1|A5|A|1338
9BH5|1|A5|A|1339

Current chains

Chain A5

28S rRNA

Nearby chains

Chain CS

Large ribosomal subunit protein eL20

Chain Cm

Ubiquitin-ribosomal protein eL40 fusion protein